Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Gm18246-201ENSMUST00000221023 728 ntBASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.13■□□□□ 0.01
Tnfrsf11bO08712 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf11bO08712 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gm11452-201ENSMUST00000122376 690 ntBASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gm4899-201ENSMUST00000178708 719 ntBASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gm17971-201ENSMUST00000190239 806 ntBASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf11bO08712 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms