Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.67□□□□□ -0.22
TprF6ZDS4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.67□□□□□ -0.22
TprF6ZDS4 Gm38225-201ENSMUST00000194001 393 ntBASIC13.67□□□□□ -0.22
TprF6ZDS4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.67□□□□□ -0.22
TprF6ZDS4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TprF6ZDS4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.67□□□□□ -0.22
TprF6ZDS4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TprF6ZDS4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TprF6ZDS4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TprF6ZDS4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.66□□□□□ -0.22
TprF6ZDS4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm16026-204ENSMUST00000162652 683 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 Shd-206ENSMUST00000225145 998 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm15236-201ENSMUST00000117309 379 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm12742-201ENSMUST00000117326 410 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm27533-201ENSMUST00000183800 152 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Gm8515-201ENSMUST00000194852 576 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.66□□□□□ -0.22
TprF6ZDS4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TprF6ZDS4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TprF6ZDS4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TprF6ZDS4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Gm12957-201ENSMUST00000117835 377 ntBASIC13.65□□□□□ -0.22
TprF6ZDS4 Gm15321-201ENSMUST00000121290 288 ntBASIC13.65□□□□□ -0.22
TprF6ZDS4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TprF6ZDS4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TprF6ZDS4 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.65□□□□□ -0.22
TprF6ZDS4 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.65□□□□□ -0.22
TprF6ZDS4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
TprF6ZDS4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TprF6ZDS4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
TprF6ZDS4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TprF6ZDS4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TprF6ZDS4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TprF6ZDS4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TprF6ZDS4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TprF6ZDS4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TprF6ZDS4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TprF6ZDS4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TprF6ZDS4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms