Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpsf4lE9Q2N0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpsf4lE9Q2N0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cpsf4lE9Q2N0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Gm15427-201ENSMUST00000117288 531 ntBASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cpsf4lE9Q2N0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms