Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BC035044E0CXF8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.65□□□□□ -0.38
BC035044E0CXF8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
BC035044E0CXF8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BC035044E0CXF8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BC035044E0CXF8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
BC035044E0CXF8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BC035044E0CXF8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.65□□□□□ -0.39
BC035044E0CXF8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.65□□□□□ -0.39
BC035044E0CXF8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
BC035044E0CXF8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.64□□□□□ -0.39
BC035044E0CXF8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.64□□□□□ -0.39
BC035044E0CXF8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BC035044E0CXF8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gm18489-201ENSMUST00000172565 551 ntBASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.63□□□□□ -0.39
BC035044E0CXF8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.63□□□□□ -0.39
BC035044E0CXF8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.63□□□□□ -0.39
BC035044E0CXF8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
BC035044E0CXF8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.62□□□□□ -0.39
BC035044E0CXF8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms