Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc194A0A140LIT1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc194A0A140LIT1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc194A0A140LIT1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc194A0A140LIT1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Gm9682-201ENSMUST00000197505 556 ntBASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc194A0A140LIT1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Gm12134-201ENSMUST00000122109 520 ntBASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Birc2-201ENSMUST00000054878 378 ntBASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc194A0A140LIT1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Gm9103-201ENSMUST00000119371 405 ntBASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Gm27459-201ENSMUST00000184860 107 ntBASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Gm6376-201ENSMUST00000209407 580 ntBASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms