Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm15358-201ENSMUST00000119249 520 ntBASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm27742-201ENSMUST00000184667 60 ntBASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm10252-201ENSMUST00000209541 832 ntBASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Gm8655-201ENSMUST00000221159 852 ntBASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav15-2-dv6-2A0A075B650 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms