Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Gm24158-201ENSMUST00000175263 71 ntBASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Lhx6Q9R1R0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm7238-201ENSMUST00000206467 973 ntBASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm18062-201ENSMUST00000208020 547 ntBASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm18055-201ENSMUST00000208254 547 ntBASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm44845-201ENSMUST00000208773 335 ntBASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx6Q9R1R0 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Gm42619-201ENSMUST00000197564 1136 ntBASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Lhx6Q9R1R0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms