Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 App-207ENSMUST00000227737 2827 ntBASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Ripk4Q9ERK0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Gm25948-201ENSMUST00000175334 112 ntBASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ripk4Q9ERK0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Mir449b-201ENSMUST00000104833 80 ntBASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ripk4Q9ERK0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.14■□□□□ 0.5
Ripk4Q9ERK0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Gm27430-201ENSMUST00000184585 107 ntBASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Gm44333-201ENSMUST00000197168 107 ntBASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ripk4Q9ERK0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ripk4Q9ERK0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms