Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssr1Q9CY50 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssr1Q9CY50 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ssr1Q9CY50 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ssr1Q9CY50 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ssr1Q9CY50 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ssr1Q9CY50 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Gm18669-201ENSMUST00000216049 778 ntBASIC16.2■□□□□ 0.18
Ssr1Q9CY50 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Efs-202ENSMUST00000227037 2540 ntBASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssr1Q9CY50 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssr1Q9CY50 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms