Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Rer1Q9CQU3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rer1Q9CQU3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rer1Q9CQU3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.21□□□□□ -0.46
Rer1Q9CQU3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Gm18489-201ENSMUST00000172565 551 ntBASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms