Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ska1Q9CPV1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Gm17807-201ENSMUST00000186869 298 ntBASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ska1Q9CPV1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gm4459-201ENSMUST00000118750 468 ntBASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gm7977-201ENSMUST00000193787 748 ntBASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gm8655-201ENSMUST00000221159 852 ntBASIC14.09□□□□□ -0.15
Ska1Q9CPV1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ska1Q9CPV1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ska1Q9CPV1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ska1Q9CPV1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ska1Q9CPV1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ska1Q9CPV1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ska1Q9CPV1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Gm18622-201ENSMUST00000219361 595 ntBASIC14.08□□□□□ -0.16
Ska1Q9CPV1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.08□□□□□ -0.16
Ska1Q9CPV1 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms