Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Gm27300-201ENSMUST00000184085 97 ntBASIC14.81□□□□□ -0.04
Trim33Q99PP7 Gm27335-201ENSMUST00000184758 97 ntBASIC14.81□□□□□ -0.04
Trim33Q99PP7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.81□□□□□ -0.04
Trim33Q99PP7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.8□□□□□ -0.04
Trim33Q99PP7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Gm18206-201ENSMUST00000207027 926 ntBASIC14.8□□□□□ -0.04
Trim33Q99PP7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.8□□□□□ -0.04
Trim33Q99PP7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim33Q99PP7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 AW822252-206ENSMUST00000208904 237 ntBASIC14.79□□□□□ -0.04
Trim33Q99PP7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Gm5364-201ENSMUST00000216789 889 ntBASIC14.79□□□□□ -0.04
Trim33Q99PP7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Gm18246-201ENSMUST00000221023 728 ntBASIC14.79□□□□□ -0.04
Trim33Q99PP7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.79□□□□□ -0.04
Trim33Q99PP7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim33Q99PP7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.78□□□□□ -0.04
Trim33Q99PP7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms