Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col25a1Q99MQ5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col25a1Q99MQ5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col25a1Q99MQ5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Snora78-201ENSMUST00000158630 128 ntBASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col25a1Q99MQ5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col25a1Q99MQ5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col25a1Q99MQ5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Gm4875-201ENSMUST00000118257 786 ntBASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.38■□□□□ 0.05
Col25a1Q99MQ5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms