Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scrt1Q99M85 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scrt1Q99M85 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scrt1Q99M85 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Scrt1Q99M85 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Scrt1Q99M85 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scrt1Q99M85 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.08□□□□□ -0.32
Scrt1Q99M85 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.08□□□□□ -0.32
Scrt1Q99M85 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.08□□□□□ -0.32
Scrt1Q99M85 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.08□□□□□ -0.32
Scrt1Q99M85 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scrt1Q99M85 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 BC037039-201ENSMUST00000192003 2205 ntBASIC13.07□□□□□ -0.32
Scrt1Q99M85 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.07□□□□□ -0.32
Scrt1Q99M85 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Gm14127-201ENSMUST00000117906 678 ntBASIC13.07□□□□□ -0.32
Scrt1Q99M85 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Gm27618-201ENSMUST00000183671 60 ntBASIC13.07□□□□□ -0.32
Scrt1Q99M85 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.07□□□□□ -0.32
Scrt1Q99M85 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Scrt1Q99M85 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.06□□□□□ -0.32
Scrt1Q99M85 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scrt1Q99M85 Gm12008-201ENSMUST00000117791 755 ntBASIC13.06□□□□□ -0.32
Scrt1Q99M85 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms