Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Gm14722-201ENSMUST00000118943 689 ntBASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Gm44344-201ENSMUST00000200287 129 ntBASIC14.9□□□□□ -0.02
Cstf1Q99LC2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Gm18766-201ENSMUST00000189811 808 ntBASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Gm6745-201ENSMUST00000199216 526 ntBASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Gm7775-201ENSMUST00000218871 853 ntBASIC14.89□□□□□ -0.03
Cstf1Q99LC2 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cstf1Q99LC2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Gm6912-201ENSMUST00000117218 544 ntBASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Gm6218-201ENSMUST00000219812 628 ntBASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cstf1Q99LC2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Cstf1Q99LC2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms