Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Efs-202ENSMUST00000227037 2540 ntBASIC15.85■□□□□ 0.13
Pcdha9Q91Y11 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Rpph1-201ENSMUST00000175096 319 ntBASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha9Q91Y11 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Pcdha9Q91Y11 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha9Q91Y11 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdha9Q91Y11 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha9Q91Y11 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Gm8749-201ENSMUST00000117737 331 ntBASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Gm13464-201ENSMUST00000119418 935 ntBASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms