Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Gm7775-201ENSMUST00000218871 853 ntBASIC14.75□□□□□ -0.05
Vsx1Q91V10 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vsx1Q91V10 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.74□□□□□ -0.05
Vsx1Q91V10 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.74□□□□□ -0.05
Vsx1Q91V10 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Gm15483-201ENSMUST00000120338 456 ntBASIC14.74□□□□□ -0.05
Vsx1Q91V10 Gm14767-201ENSMUST00000121559 586 ntBASIC14.74□□□□□ -0.05
Vsx1Q91V10 Gm18737-201ENSMUST00000173594 937 ntBASIC14.74□□□□□ -0.05
Vsx1Q91V10 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.74□□□□□ -0.05
Vsx1Q91V10 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.73□□□□□ -0.05
Vsx1Q91V10 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Gm27838-201ENSMUST00000184829 128 ntBASIC14.73□□□□□ -0.05
Vsx1Q91V10 Gm18766-201ENSMUST00000189811 808 ntBASIC14.73□□□□□ -0.05
Vsx1Q91V10 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.73□□□□□ -0.05
Vsx1Q91V10 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.73□□□□□ -0.05
Vsx1Q91V10 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vsx1Q91V10 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vsx1Q91V10 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.72□□□□□ -0.05
Vsx1Q91V10 Gm12859-201ENSMUST00000117834 427 ntBASIC14.72□□□□□ -0.05
Vsx1Q91V10 Gm15321-201ENSMUST00000121290 288 ntBASIC14.72□□□□□ -0.05
Vsx1Q91V10 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.72□□□□□ -0.05
Vsx1Q91V10 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Gm6218-201ENSMUST00000219812 628 ntBASIC14.72□□□□□ -0.05
Vsx1Q91V10 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vsx1Q91V10 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms