Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Gm9385-201ENSMUST00000117563 472 ntBASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpap2Q8VC34 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.34■□□□□ 0.21
Rpap2Q8VC34 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpap2Q8VC34 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpap2Q8VC34 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rpap2Q8VC34 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.33■□□□□ 0.21
Rpap2Q8VC34 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Gm14494-201ENSMUST00000118786 435 ntBASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpap2Q8VC34 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpap2Q8VC34 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms