Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb1Q8R3Z5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 AC140451.2-202ENSMUST00000226156 574 ntBASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Sybu-209ENSMUST00000228639 4113 ntBASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb1Q8R3Z5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Gm21756-201ENSMUST00000178380 930 ntBASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb1Q8R3Z5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm11233-201ENSMUST00000122357 634 ntBASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm45359-201ENSMUST00000210635 427 ntBASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Gm15182-201ENSMUST00000120832 1676 ntBASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cacnb1Q8R3Z5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms