Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Gm27742-201ENSMUST00000184667 60 ntBASIC9.4□□□□□ -0.9
Cystm1Q8K353 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC9.4□□□□□ -0.9
Cystm1Q8K353 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Gm12626-201ENSMUST00000117339 1983 ntBASIC9.4□□□□□ -0.9
Cystm1Q8K353 Gm12623-201ENSMUST00000119849 1983 ntBASIC9.4□□□□□ -0.9
Cystm1Q8K353 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Cystm1Q8K353 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Gm2420-202ENSMUST00000202224 2249 ntBASIC9.39□□□□□ -0.91
Cystm1Q8K353 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Gm13186-201ENSMUST00000118031 316 ntBASIC9.39□□□□□ -0.91
Cystm1Q8K353 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Gm3272-201ENSMUST00000181181 1229 ntBASIC9.39□□□□□ -0.91
Cystm1Q8K353 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Gm27000-201ENSMUST00000182943 842 ntBASIC9.39□□□□□ -0.91
Cystm1Q8K353 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Gm10566-201ENSMUST00000086739 996 ntBASIC9.39□□□□□ -0.91
Cystm1Q8K353 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cystm1Q8K353 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Gm6190-201ENSMUST00000220683 1374 ntBASIC9.38□□□□□ -0.91
Cystm1Q8K353 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cystm1Q8K353 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms