Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim68Q8K243 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Trim68Q8K243 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.2■□□□□ 0.18
Trim68Q8K243 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.2■□□□□ 0.18
Trim68Q8K243 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.2■□□□□ 0.18
Trim68Q8K243 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Gm10253-201ENSMUST00000194270 940 ntBASIC16.2■□□□□ 0.18
Trim68Q8K243 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim68Q8K243 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.2■□□□□ 0.18
Trim68Q8K243 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim68Q8K243 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim68Q8K243 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.19■□□□□ 0.18
Trim68Q8K243 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Gm6257-201ENSMUST00000163864 910 ntBASIC16.19■□□□□ 0.18
Trim68Q8K243 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.19■□□□□ 0.18
Trim68Q8K243 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim68Q8K243 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim68Q8K243 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim68Q8K243 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim68Q8K243 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Gm12151-201ENSMUST00000121374 290 ntBASIC16.18■□□□□ 0.18
Trim68Q8K243 Gm24158-201ENSMUST00000175263 71 ntBASIC16.18■□□□□ 0.18
Trim68Q8K243 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim68Q8K243 Gm27437-201ENSMUST00000183429 107 ntBASIC16.18■□□□□ 0.18
Trim68Q8K243 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim68Q8K243 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim68Q8K243 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.18■□□□□ 0.18
Trim68Q8K243 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.18■□□□□ 0.18
Trim68Q8K243 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim68Q8K243 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim68Q8K243 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim68Q8K243 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim68Q8K243 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim68Q8K243 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim68Q8K243 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim68Q8K243 Gm22065-201ENSMUST00000103753 110 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms