Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm5682-201ENSMUST00000173402 505 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44357-201ENSMUST00000195897 142 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm19658-201ENSMUST00000196231 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44367-201ENSMUST00000196836 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44350-201ENSMUST00000197197 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44390-201ENSMUST00000197533 144 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44313-201ENSMUST00000198018 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44486-201ENSMUST00000198508 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44314-201ENSMUST00000199263 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44394-201ENSMUST00000199558 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44484-201ENSMUST00000199873 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44466-201ENSMUST00000200264 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm44359-201ENSMUST00000200671 138 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.31□□□□□ -0.28
ShfQ8CG80 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.31□□□□□ -0.28
ShfQ8CG80 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ShfQ8CG80 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Gm25990-201ENSMUST00000102440 86 ntBASIC13.3□□□□□ -0.28
ShfQ8CG80 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.3□□□□□ -0.28
ShfQ8CG80 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.3□□□□□ -0.28
ShfQ8CG80 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ShfQ8CG80 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
ShfQ8CG80 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShfQ8CG80 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms