Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smc4Q8CG47 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Gm25948-201ENSMUST00000175334 112 ntBASIC18.36■□□□□ 0.53
Smc4Q8CG47 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smc4Q8CG47 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smc4Q8CG47 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.35■□□□□ 0.53
Smc4Q8CG47 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.35■□□□□ 0.53
Smc4Q8CG47 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.34■□□□□ 0.53
Smc4Q8CG47 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Gm9824-201ENSMUST00000178707 561 ntBASIC18.34■□□□□ 0.53
Smc4Q8CG47 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.34■□□□□ 0.53
Smc4Q8CG47 Gm10576-201ENSMUST00000191927 825 ntBASIC18.34■□□□□ 0.53
Smc4Q8CG47 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Smc4Q8CG47 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc4Q8CG47 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc4Q8CG47 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc4Q8CG47 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.33■□□□□ 0.53
Smc4Q8CG47 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Smc4Q8CG47 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc4Q8CG47 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.33■□□□□ 0.53
Smc4Q8CG47 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Smc4Q8CG47 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc4Q8CG47 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Smc4Q8CG47 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.33■□□□□ 0.52
Smc4Q8CG47 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc4Q8CG47 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms