Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm14722-201ENSMUST00000118943 689 ntBASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.61■□□□□ 0.41
Nup88Q8CEC0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup88Q8CEC0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Gm45167-201ENSMUST00000208007 322 ntBASIC17.6■□□□□ 0.41
Nup88Q8CEC0 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup88Q8CEC0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Gm27300-201ENSMUST00000184085 97 ntBASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Gm27335-201ENSMUST00000184758 97 ntBASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nup88Q8CEC0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup88Q8CEC0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Gm4899-201ENSMUST00000178708 719 ntBASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.58■□□□□ 0.4
Nup88Q8CEC0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup88Q8CEC0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms