Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcpip1Q8CDG3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcpip1Q8CDG3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcpip1Q8CDG3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vcpip1Q8CDG3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vcpip1Q8CDG3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.03■□□□□ 0.16
Vcpip1Q8CDG3 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Gm23547-201ENSMUST00000158210 271 ntBASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Gm2213-201ENSMUST00000197485 688 ntBASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Gm6376-201ENSMUST00000209407 580 ntBASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vcpip1Q8CDG3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vcpip1Q8CDG3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vcpip1Q8CDG3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vcpip1Q8CDG3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vcpip1Q8CDG3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vcpip1Q8CDG3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vcpip1Q8CDG3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vcpip1Q8CDG3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vcpip1Q8CDG3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Gm5682-201ENSMUST00000173402 505 ntBASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Gm10499-201ENSMUST00000174094 934 ntBASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Gm37153-201ENSMUST00000193637 231 ntBASIC16.01■□□□□ 0.15
Vcpip1Q8CDG3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms