Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf3Q8C120 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Gm43767-201ENSMUST00000198933 381 ntBASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf3Q8C120 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf3Q8C120 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms