Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf18Q8BM39 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf18Q8BM39 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Gm25406-201ENSMUST00000157599 105 ntBASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Gm44454-201ENSMUST00000198541 138 ntBASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf18Q8BM39 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf18Q8BM39 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Olfr129-201ENSMUST00000122318 993 ntBASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Mir3081-201ENSMUST00000175305 84 ntBASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Gm9172-201ENSMUST00000212092 954 ntBASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf18Q8BM39 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms