Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmbox1Q8BJA3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Gm13365-201ENSMUST00000121188 973 ntBASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.59□□□□□ -0.07
Hmbox1Q8BJA3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmbox1Q8BJA3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmbox1Q8BJA3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Hmbox1Q8BJA3 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.58□□□□□ -0.07
Hmbox1Q8BJA3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmbox1Q8BJA3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Gm13823-201ENSMUST00000119930 345 ntBASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.58□□□□□ -0.08
Hmbox1Q8BJA3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Gm27646-201ENSMUST00000183989 110 ntBASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hmbox1Q8BJA3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms