Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Gm6218-201ENSMUST00000219812 628 ntBASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Npas4Q8BGD7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Gm3436-201ENSMUST00000179930 840 ntBASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Gm28631-201ENSMUST00000190740 334 ntBASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Gm2451-201ENSMUST00000199447 999 ntBASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Gm10290-201ENSMUST00000200451 999 ntBASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Gm43703-201ENSMUST00000200523 763 ntBASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Npas4Q8BGD7 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Gm12490-201ENSMUST00000120255 560 ntBASIC15.62■□□□□ 0.09
Npas4Q8BGD7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Gm27631-201ENSMUST00000184163 466 ntBASIC15.62■□□□□ 0.09
Npas4Q8BGD7 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.62■□□□□ 0.09
Npas4Q8BGD7 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Npas4Q8BGD7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.61■□□□□ 0.09
Npas4Q8BGD7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms