Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38bQ80SY5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Prpf38bQ80SY5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Gm9682-201ENSMUST00000197505 556 ntBASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38bQ80SY5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf38bQ80SY5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Prpf38bQ80SY5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.58■□□□□ 0.09
Prpf38bQ80SY5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Prpf38bQ80SY5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm6257-201ENSMUST00000163864 910 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.58■□□□□ 0.08
Prpf38bQ80SY5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms