Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.78□□□□□ -0.2
Pif1Q80SX8 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.78□□□□□ -0.2
Pif1Q80SX8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.78□□□□□ -0.2
Pif1Q80SX8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pif1Q80SX8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pif1Q80SX8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pif1Q80SX8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pif1Q80SX8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pif1Q80SX8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pif1Q80SX8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pif1Q80SX8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pif1Q80SX8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.77□□□□□ -0.21
Pif1Q80SX8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pif1Q80SX8 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.76□□□□□ -0.21
Pif1Q80SX8 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.76□□□□□ -0.21
Pif1Q80SX8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.76□□□□□ -0.21
Pif1Q80SX8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pif1Q80SX8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pif1Q80SX8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms