Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Gm6376-201ENSMUST00000209407 580 ntBASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otub1Q7TQI3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Otub1Q7TQI3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Gm25990-201ENSMUST00000102440 86 ntBASIC14.2□□□□□ -0.14
Otub1Q7TQI3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otub1Q7TQI3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm8318-201ENSMUST00000182954 872 ntBASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm6089-201ENSMUST00000197666 938 ntBASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otub1Q7TQI3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Gm7153-201ENSMUST00000117092 455 ntBASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.18□□□□□ -0.14
Otub1Q7TQI3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Otub1Q7TQI3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms