Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.17□□□□□ -0.46
Vma21Q78T54 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.16□□□□□ -0.46
Vma21Q78T54 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.16□□□□□ -0.46
Vma21Q78T54 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.16□□□□□ -0.46
Vma21Q78T54 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.16□□□□□ -0.46
Vma21Q78T54 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.16□□□□□ -0.46
Vma21Q78T54 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vma21Q78T54 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vma21Q78T54 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Vma21Q78T54 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.15□□□□□ -0.46
Vma21Q78T54 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vma21Q78T54 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vma21Q78T54 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Vma21Q78T54 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vma21Q78T54 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.15□□□□□ -0.46
Vma21Q78T54 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.15□□□□□ -0.46
Vma21Q78T54 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Vma21Q78T54 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vma21Q78T54 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Vma21Q78T54 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vma21Q78T54 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vma21Q78T54 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vma21Q78T54 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vma21Q78T54 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vma21Q78T54 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.47
Vma21Q78T54 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vma21Q78T54 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.14□□□□□ -0.47
Vma21Q78T54 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms