Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RfflQ6ZQM0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RfflQ6ZQM0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.46□□□□□ -0.1
RfflQ6ZQM0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RfflQ6ZQM0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RfflQ6ZQM0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RfflQ6ZQM0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Gm18959-201ENSMUST00000208954 655 ntBASIC14.43□□□□□ -0.1
RfflQ6ZQM0 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RfflQ6ZQM0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms