Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 AGGF1P2-201ENST00000426656 2106 ntBASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 KRT18P55-202ENST00000578578 1546 ntBASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 AC006015.1-201ENST00000429970 570 ntBASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 AC016405.3-201ENST00000607710 860 ntBASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 AL603756.1-201ENST00000606511 2163 ntBASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 LINC02199-201ENST00000506655 2702 ntBASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KCNIP4Q6PIL6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 SBF1P1-201ENST00000444527 5631 ntBASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 AL589743.5-201ENST00000616611 1050 ntBASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 OR10C1-204ENST00000622521 1039 ntBASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KCNIP4Q6PIL6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 GMCL1P1-201ENST00000463439 1581 ntBASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 CYP2T1P-201ENST00000432607 1285 ntBASIC13.85□□□□□ -0.19
KCNIP4Q6PIL6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms