Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd4Q6PDQ2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Gm28760-201ENSMUST00000185995 736 ntBASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd4Q6PDQ2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC19.21■□□□□ 0.66
Chd4Q6PDQ2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chd4Q6PDQ2 Gm12585-201ENSMUST00000117307 290 ntBASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Gm45384-201ENSMUST00000210451 277 ntBASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd4Q6PDQ2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Gm10766-202ENSMUST00000194123 606 ntBASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd4Q6PDQ2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chd4Q6PDQ2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms