Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.47□□□□□ -0.09
Cpsf6Q6NVF9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 AV026068-213ENSMUST00000223675 1171 ntBASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf6Q6NVF9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.46□□□□□ -0.1
Cpsf6Q6NVF9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf6Q6NVF9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf6Q6NVF9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf6Q6NVF9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf6Q6NVF9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf6Q6NVF9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf6Q6NVF9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms