Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Gm27628-201ENSMUST00000184911 107 ntBASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Sp140Q6NSQ5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Mir5126-201ENSMUST00000175513 77 ntBASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sp140Q6NSQ5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Gm27300-201ENSMUST00000184085 97 ntBASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Gm27335-201ENSMUST00000184758 97 ntBASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sp140Q6NSQ5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sp140Q6NSQ5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms