Protein–RNA interactions for Protein: Q62219

Tgfb1i1, Transforming growth factor beta-1-induced transcript 1 protein, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1i1Q62219 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Gm5479-201ENSMUST00000160578 435 ntBASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Gm25948-201ENSMUST00000175334 112 ntBASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1i1Q62219 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Gm13616-201ENSMUST00000120600 222 ntBASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Gm25925-201ENSMUST00000158314 306 ntBASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Gm2451-201ENSMUST00000199447 999 ntBASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Gm10290-201ENSMUST00000200451 999 ntBASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1i1Q62219 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Gm5779-201ENSMUST00000218467 910 ntBASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1i1Q62219 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Gm29541-201ENSMUST00000191351 678 ntBASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Gm38225-201ENSMUST00000194001 393 ntBASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1i1Q62219 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms