Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Mre11Q61216 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mre11Q61216 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Mre11Q61216 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Mre11Q61216 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Mre11Q61216 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.86■□□□□ 0.45
Mre11Q61216 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.86■□□□□ 0.45
Mre11Q61216 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.86■□□□□ 0.45
Mre11Q61216 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Mre11Q61216 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Mre11Q61216 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Mre11Q61216 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mre11Q61216 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.85■□□□□ 0.45
Mre11Q61216 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.85■□□□□ 0.45
Mre11Q61216 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Mre11Q61216 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mre11Q61216 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Mre11Q61216 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.85■□□□□ 0.45
Mre11Q61216 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Mre11Q61216 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.85■□□□□ 0.45
Mre11Q61216 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.85■□□□□ 0.45
Mre11Q61216 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.85■□□□□ 0.45
Mre11Q61216 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Mre11Q61216 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mre11Q61216 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mre11Q61216 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.84■□□□□ 0.45
Mre11Q61216 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Mre11Q61216 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.84■□□□□ 0.45
Mre11Q61216 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Mre11Q61216 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Mre11Q61216 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.84■□□□□ 0.45
Mre11Q61216 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Mre11Q61216 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
Mre11Q61216 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.84■□□□□ 0.45
Mre11Q61216 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.84■□□□□ 0.45
Mre11Q61216 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Mre11Q61216 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.84■□□□□ 0.45
Mre11Q61216 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mre11Q61216 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.84■□□□□ 0.45
Mre11Q61216 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mre11Q61216 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Mre11Q61216 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mre11Q61216 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.83■□□□□ 0.45
Mre11Q61216 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mre11Q61216 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mre11Q61216 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms