Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf223Q3UV31 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Gm5779-201ENSMUST00000218467 910 ntBASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf223Q3UV31 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Rnf223Q3UV31 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf223Q3UV31 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf223Q3UV31 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf223Q3UV31 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Gm44872-201ENSMUST00000207864 420 ntBASIC14.45□□□□□ -0.1
Rnf223Q3UV31 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf223Q3UV31 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf223Q3UV31 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms