Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.38□□□□□ -0.43
Znf48Q3US17 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.38□□□□□ -0.43
Znf48Q3US17 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Gm44872-201ENSMUST00000207864 420 ntBASIC12.38□□□□□ -0.43
Znf48Q3US17 Gm9172-201ENSMUST00000212092 954 ntBASIC12.38□□□□□ -0.43
Znf48Q3US17 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Znf48Q3US17 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Znf48Q3US17 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Znf48Q3US17 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.38□□□□□ -0.43
Znf48Q3US17 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Znf48Q3US17 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.37□□□□□ -0.43
Znf48Q3US17 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Gm17271-201ENSMUST00000165535 355 ntBASIC12.37□□□□□ -0.43
Znf48Q3US17 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.37□□□□□ -0.43
Znf48Q3US17 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.37□□□□□ -0.43
Znf48Q3US17 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Znf48Q3US17 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Znf48Q3US17 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.36□□□□□ -0.43
Znf48Q3US17 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 AC125117.2-201ENSMUST00000228344 1140 ntBASIC12.36□□□□□ -0.43
Znf48Q3US17 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms