Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Gm12896-201ENSMUST00000118430 226 ntBASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.75□□□□□ -0.69
Cks1brtQ3UNC9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Mir5133-201ENSMUST00000174955 77 ntBASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Gm18421-201ENSMUST00000204122 625 ntBASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cks1brtQ3UNC9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms