Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox4Q06831 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.66□□□□□ -0.06
Sox4Q06831 Gm11025-201ENSMUST00000140773 466 ntBASIC14.66□□□□□ -0.06
Sox4Q06831 Gm16026-204ENSMUST00000162652 683 ntBASIC14.66□□□□□ -0.06
Sox4Q06831 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.66□□□□□ -0.06
Sox4Q06831 Gm43575-201ENSMUST00000196420 516 ntBASIC14.66□□□□□ -0.06
Sox4Q06831 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.66□□□□□ -0.06
Sox4Q06831 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Gm5867-201ENSMUST00000063197 592 ntBASIC14.66□□□□□ -0.06
Sox4Q06831 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.66□□□□□ -0.06
Sox4Q06831 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox4Q06831 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox4Q06831 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox4Q06831 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox4Q06831 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sox4Q06831 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Sox4Q06831 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox4Q06831 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Sox4Q06831 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox4Q06831 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.65□□□□□ -0.06
Sox4Q06831 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.65□□□□□ -0.06
Sox4Q06831 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox4Q06831 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox4Q06831 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.65□□□□□ -0.06
Sox4Q06831 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox4Q06831 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.65□□□□□ -0.06
Sox4Q06831 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox4Q06831 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Sox4Q06831 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Sox4Q06831 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sox4Q06831 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Sox4Q06831 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox4Q06831 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Sox4Q06831 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Sox4Q06831 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Gm23935-201ENSMUST00000102303 57 ntBASIC14.64□□□□□ -0.07
Sox4Q06831 Gm24270-201ENSMUST00000102326 57 ntBASIC14.64□□□□□ -0.07
Sox4Q06831 Gm24245-201ENSMUST00000157318 57 ntBASIC14.64□□□□□ -0.07
Sox4Q06831 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Sox4Q06831 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox4Q06831 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sox4Q06831 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.64□□□□□ -0.07
Sox4Q06831 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox4Q06831 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.64□□□□□ -0.07
Sox4Q06831 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sox4Q06831 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox4Q06831 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.63□□□□□ -0.07
Sox4Q06831 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms