Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Gm44335-201ENSMUST00000196879 141 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Gm44297-201ENSMUST00000198304 141 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 Gm44346-201ENSMUST00000198851 141 ntBASIC14.24□□□□□ -0.13
Atf4Q06507 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Atf4Q06507 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.24□□□□□ -0.13
Atf4Q06507 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Atf4Q06507 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atf4Q06507 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.23□□□□□ -0.13
Atf4Q06507 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.23□□□□□ -0.13
Atf4Q06507 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Atf4Q06507 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.23□□□□□ -0.13
Atf4Q06507 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC14.23□□□□□ -0.13
Atf4Q06507 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Atf4Q06507 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Gm27301-201ENSMUST00000184012 127 ntBASIC14.23□□□□□ -0.13
Atf4Q06507 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.23□□□□□ -0.13
Atf4Q06507 Gm36943-201ENSMUST00000194422 282 ntBASIC14.23□□□□□ -0.13
Atf4Q06507 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Gm9682-201ENSMUST00000197505 556 ntBASIC14.23□□□□□ -0.13
Atf4Q06507 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.23□□□□□ -0.13
Atf4Q06507 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.23□□□□□ -0.13
Atf4Q06507 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.23□□□□□ -0.13
Atf4Q06507 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.23□□□□□ -0.13
Atf4Q06507 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.23□□□□□ -0.13
Atf4Q06507 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atf4Q06507 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Atf4Q06507 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.22□□□□□ -0.13
Atf4Q06507 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.22□□□□□ -0.13
Atf4Q06507 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.22□□□□□ -0.13
Atf4Q06507 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Atf4Q06507 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Atf4Q06507 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.22□□□□□ -0.13
Atf4Q06507 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.22□□□□□ -0.13
Atf4Q06507 Gm45747-201ENSMUST00000212203 999 ntBASIC14.22□□□□□ -0.13
Atf4Q06507 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.22□□□□□ -0.13
Atf4Q06507 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC14.22□□□□□ -0.13
Atf4Q06507 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Atf4Q06507 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Atf4Q06507 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.22□□□□□ -0.13
Atf4Q06507 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.22□□□□□ -0.13
Atf4Q06507 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atf4Q06507 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Atf4Q06507 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Atf4Q06507 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Atf4Q06507 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.21□□□□□ -0.13
Atf4Q06507 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atf4Q06507 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms