Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.82□□□□□ -0.68
Hspg2Q05793 Efs-202ENSMUST00000227037 2540 ntBASIC10.82□□□□□ -0.68
Hspg2Q05793 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.82□□□□□ -0.68
Hspg2Q05793 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hspg2Q05793 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.82□□□□□ -0.68
Hspg2Q05793 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Gm45784-201ENSMUST00000188360 142 ntBASIC10.82□□□□□ -0.68
Hspg2Q05793 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hspg2Q05793 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm12390-201ENSMUST00000117897 397 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Hspg2Q05793 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.81□□□□□ -0.68
Hspg2Q05793 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.81□□□□□ -0.68
Hspg2Q05793 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm2451-201ENSMUST00000199447 999 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm10290-201ENSMUST00000200451 999 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Hspg2Q05793 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm16011-201ENSMUST00000121567 2662 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm22018-201ENSMUST00000104357 131 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Gm4984-201ENSMUST00000115987 360 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 Mir7070-201ENSMUST00000183657 86 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.81□□□□□ -0.68
Hspg2Q05793 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hspg2Q05793 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hspg2Q05793 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Snora78-201ENSMUST00000158630 128 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Mir6392-201ENSMUST00000184924 108 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm28911-201ENSMUST00000188837 117 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm15823-201ENSMUST00000064305 670 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm6091-201ENSMUST00000098307 165 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hspg2Q05793 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hspg2Q05793 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.8□□□□□ -0.68
Hspg2Q05793 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.8□□□□□ -0.68
Hspg2Q05793 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.8□□□□□ -0.68
Hspg2Q05793 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hspg2Q05793 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.8□□□□□ -0.68
Hspg2Q05793 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hspg2Q05793 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms