Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn1bP97952 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.68□□□□□ -0.22
Scn1bP97952 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn1bP97952 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn1bP97952 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Scn1bP97952 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn1bP97952 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Scn1bP97952 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn1bP97952 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Gm18101-201ENSMUST00000215769 548 ntBASIC13.67□□□□□ -0.22
Scn1bP97952 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn1bP97952 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Scn1bP97952 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn1bP97952 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn1bP97952 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Scn1bP97952 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn1bP97952 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.66□□□□□ -0.22
Scn1bP97952 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn1bP97952 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.66□□□□□ -0.22
Scn1bP97952 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Scn1bP97952 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.66□□□□□ -0.22
Scn1bP97952 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Gm6433-201ENSMUST00000118634 875 ntBASIC13.66□□□□□ -0.22
Scn1bP97952 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn1bP97952 Gm21559-201ENSMUST00000220638 855 ntBASIC13.66□□□□□ -0.22
Scn1bP97952 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Gm8587-201ENSMUST00000076538 843 ntBASIC13.66□□□□□ -0.22
Scn1bP97952 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Scn1bP97952 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn1bP97952 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn1bP97952 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.66□□□□□ -0.22
Scn1bP97952 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.66□□□□□ -0.22
Scn1bP97952 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn1bP97952 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn1bP97952 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn1bP97952 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn1bP97952 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn1bP97952 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn1bP97952 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn1bP97952 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn1bP97952 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms