Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
SgcbP82349 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SgcbP82349 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcbP82349 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcbP82349 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcbP82349 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcbP82349 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SgcbP82349 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SgcbP82349 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.29□□□□□ -0.28
SgcbP82349 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
SgcbP82349 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.29□□□□□ -0.28
SgcbP82349 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.29□□□□□ -0.28
SgcbP82349 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.29□□□□□ -0.28
SgcbP82349 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.29□□□□□ -0.28
SgcbP82349 Gm17968-201ENSMUST00000194902 784 ntBASIC13.29□□□□□ -0.28
SgcbP82349 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Gm10175-201ENSMUST00000086013 645 ntBASIC13.29□□□□□ -0.28
SgcbP82349 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.29□□□□□ -0.28
SgcbP82349 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SgcbP82349 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SgcbP82349 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.29□□□□□ -0.28
SgcbP82349 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcbP82349 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SgcbP82349 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Asic1-205ENSMUST00000228185 1818 ntBASIC13.28□□□□□ -0.28
SgcbP82349 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Gm14822-201ENSMUST00000122247 291 ntBASIC13.28□□□□□ -0.28
SgcbP82349 Gm43767-201ENSMUST00000198933 381 ntBASIC13.28□□□□□ -0.28
SgcbP82349 Gm45747-201ENSMUST00000212203 999 ntBASIC13.28□□□□□ -0.28
SgcbP82349 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SgcbP82349 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SgcbP82349 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.28□□□□□ -0.28
SgcbP82349 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.28□□□□□ -0.28
SgcbP82349 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.28□□□□□ -0.28
SgcbP82349 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.28□□□□□ -0.28
SgcbP82349 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcbP82349 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SgcbP82349 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.27□□□□□ -0.28
SgcbP82349 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
SgcbP82349 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcbP82349 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcbP82349 Gm27702-201ENSMUST00000184512 56 ntBASIC13.27□□□□□ -0.29
SgcbP82349 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.27□□□□□ -0.29
SgcbP82349 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms