Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Lsm3P62311 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lsm3P62311 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm3P62311 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm3P62311 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm3P62311 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm3P62311 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm3P62311 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm3P62311 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.62□□□□□ -0.23
Lsm3P62311 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.62□□□□□ -0.23
Lsm3P62311 Gm10052-201ENSMUST00000168019 960 ntBASIC13.62□□□□□ -0.23
Lsm3P62311 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Gm7729-201ENSMUST00000050143 801 ntBASIC13.62□□□□□ -0.23
Lsm3P62311 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Lsm3P62311 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm3P62311 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm3P62311 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.61□□□□□ -0.23
Lsm3P62311 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.61□□□□□ -0.23
Lsm3P62311 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Lsm3P62311 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.61□□□□□ -0.23
Lsm3P62311 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.61□□□□□ -0.23
Lsm3P62311 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Lsm3P62311 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.61□□□□□ -0.23
Lsm3P62311 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lsm3P62311 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm3P62311 Grk6-207ENSMUST00000225925 2769 ntBASIC13.6□□□□□ -0.23
Lsm3P62311 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lsm3P62311 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lsm3P62311 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Lsm3P62311 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lsm3P62311 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.6□□□□□ -0.23
Lsm3P62311 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Lsm3P62311 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.6□□□□□ -0.23
Lsm3P62311 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.6□□□□□ -0.23
Lsm3P62311 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.6□□□□□ -0.23
Lsm3P62311 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lsm3P62311 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lsm3P62311 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms