Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lhx3P50481 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Gm11543-201ENSMUST00000120758 370 ntBASIC15.1■□□□□ 0.01
Lhx3P50481 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.1■□□□□ 0.01
Lhx3P50481 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.1■□□□□ 0.01
Lhx3P50481 Gm2451-201ENSMUST00000199447 999 ntBASIC15.1■□□□□ 0.01
Lhx3P50481 Gm10290-201ENSMUST00000200451 999 ntBASIC15.1■□□□□ 0.01
Lhx3P50481 Gm43125-201ENSMUST00000201724 730 ntBASIC15.1■□□□□ 0.01
Lhx3P50481 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.1■□□□□ 0.01
Lhx3P50481 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.1■□□□□ 0.01
Lhx3P50481 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lhx3P50481 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx3P50481 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.09■□□□□ 0.01
Lhx3P50481 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.09■□□□□ 0.01
Lhx3P50481 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.09■□□□□ 0.01
Lhx3P50481 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.09■□□□□ 0.01
Lhx3P50481 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Lhx3P50481 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Efs-202ENSMUST00000227037 2540 ntBASIC15.09■□□□□ 0.01
Lhx3P50481 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lhx3P50481 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.09■□□□□ 0.01
Lhx3P50481 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx3P50481 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.08■□□□□ 0.01
Lhx3P50481 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lhx3P50481 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lhx3P50481 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx3P50481 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.08■□□□□ 0
Lhx3P50481 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx3P50481 Gm2810-201ENSMUST00000118681 990 ntBASIC15.08■□□□□ 0
Lhx3P50481 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.08■□□□□ 0
Lhx3P50481 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.08■□□□□ 0
Lhx3P50481 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.08■□□□□ 0
Lhx3P50481 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.08■□□□□ 0
Lhx3P50481 Gm43474-201ENSMUST00000196415 774 ntBASIC15.08■□□□□ 0
Lhx3P50481 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.08■□□□□ 0
Lhx3P50481 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.08■□□□□ 0
Lhx3P50481 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx3P50481 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx3P50481 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.08■□□□□ 0
Lhx3P50481 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lhx3P50481 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx3P50481 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx3P50481 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lhx3P50481 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Lhx3P50481 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Lhx3P50481 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.07■□□□□ 0
Lhx3P50481 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.07■□□□□ 0
Lhx3P50481 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.07■□□□□ 0
Lhx3P50481 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Lhx3P50481 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lhx3P50481 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lhx3P50481 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lhx3P50481 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lhx3P50481 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms